Book your ticket from Santorini to Heraklion from €98*

Promo code

✈️Up to -50% off to Greece & abroad!

Book by September 10 and enjoy up to -50%
on all flights to Greece and abroad through March 2027

Book by September 10 and enjoy up to -50%
on all flights to Greece and abroad through March 2027

BOOK NOW!

Find the best fares from Santorini to Heraklion

September 2026
From€104*
Seen: 2 days ago
Flight Type: One Way/Economy
October 2026
Oops! It seems you are the first one to search this route this month.
November 2026
From€98*
Seen: 2 days ago
Flight Type: One Way/Economy
cmp-daily-histogram-bars-legend-min-price-aria-label €104
cmp-daily-histogram-bars-legend-max-price-aria-label €242
Displaying fares for September-2026
  • JTR–HER, 04 September, 2026: From €242
    04

    Fri

    SEP

  • JTR–HER, 05 September, 2026: From €177
    05

    Sat

  • JTR–HER, 06 September, 2026: From €242
    06

    Sun

  • JTR–HER, 07 September, 2026: From €177
    07

    Mon

  • JTR–HER, 08 September, 2026: From €177
    08

    Tue

  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    09

    Wed

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    10

    Thu

  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    11

    Fri

  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    12

    Sat

  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    13

    Sun

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    14

    Mon

  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    15

    Tue

  • JTR–HER, 16 September, 2026: From €177
    16

    Wed

  • JTR–HER, 17 September, 2026: From €177
    17

    Thu

  • JTR–HER, 18 September, 2026: From €242
    18

    Fri

  • JTR–HER, 19 September, 2026: From €177
    19

    Sat

  • JTR–HER, 20 September, 2026: From €167
    20

    Sun

  • JTR–HER, 21 September, 2026: From €153
    21

    Mon

  • JTR–HER, 22 September, 2026: From €122
    22

    Tue

  • JTR–HER, 23 September, 2026: From €142
    23

    Wed

  • JTR–HER, 24 September, 2026: From €122
    24

    Thu

  • JTR–HER, 25 September, 2026: From €142
    25

    Fri

  • JTR–HER, 26 September, 2026: From €142
    26

    Sat

  • JTR–HER, 27 September, 2026: From €142
    27

    Sun

  • JTR–HER, 28 September, 2026: From €115
    28

    Mon

  • JTR–HER, 29 September, 2026: From €104
    29

    Tue

  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    30

    Wed

  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    01

    Thu

    OCT

  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    02

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  • JTR–HER: cmp-view-offers-disclaimer. Check availability
    03

    Sat

    • Range€104-€242

    *Fares displayed have been collected within the last 48hrs and may no longer be available at time of booking. Additional fees and charges for optional products and services may apply.

    Santorini to Heraklion Flights on SKY express

    Explore SKY express Top-Pick Destinations

     

    Personalize your flight experience with extra services!

    Extra Baggage

    Wherever you fly, you can always fit a little extra in your luggage. Add extra baggage weighing fifteen (15), twenty-three (23) and thirty-two (32) kilos to each of your flights.

    SKY Fast Lane

    Add more flexibility before your flight and reduce security control time with SKY Fast Lane. The service is provided free of charge to SKY enjoy passengers of SKY express.

    Lounge Access

    Elevate your travel experience before taking off with the amenities and facilities of VIP Lounges. Available for all fares.